Nucleic Acids Research - current
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1. High-density generation of spatial transcriptomics with STAGE
2. Comprehensive genomic features indicative for Notch responsiveness
3. SifiNet: a robust and accurate method to identify feature gene sets and annotate cells
4. Genome-wide screening and functional validation of methylation barriers near promoters
5. The discovery of novel noncoding RNAs in 50 bacterial genomes
6. Comprehensive profiling of L1 retrotransposons in mouse
7. Live-cell imaging reveals the trade-off between target search flexibility and efficiency for Cas9 and Cas12a
8. Caspase-mediated processing of TRBP regulates apoptosis during viral infection
9. SARS-CoV-2 nsp15 preferentially degrades AU-rich dsRNA via its dsRNA nickase activity
10. m6ACali: machine learning-powered calibration for accurate m6A detection in MeRIP-Seq
11. Biochemical and structural characterization of Fapy•dG replication by Human DNA polymerase β
12. Examining chromatin heterogeneity through PacBio long-read sequencing of M.EcoGII methylated genomes: an m6A detection efficiency and calling bias correcting pipeline
13. Correction to ‘STIM1 translocation to the nucleus protects cells from DNA damage’
14. A novel transient receptor potential C3/C6 selective activator induces the cellular uptake of antisense oligonucleotides
15. Fourteen years of cellular deconvolution: methodology, applications, technical evaluation and outstanding challenges
16. Activity reconstitution of Kre33 and Tan1 reveals a molecular ruler mechanism in eukaryotic tRNA acetylation
17. Quantifying the activity profile of ASO and siRNA conjugates in glioblastoma xenograft tumors in vivo
18. CRISPR-Cas tools for simultaneous transcription & translation control in bacteria
19. Retraction of ‘Dissecting the splicing mechanism of the Drosophila editing enzyme; dADAR’
20. Definition of the binding specificity of the T7 bacteriophage primase by analysis of a protein binding microarray using a thermodynamic model
21. NetActivity enhances transcriptional signals by combining gene expression into robust gene set activity scores through interpretable autoencoders
22. RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation
23. SIRT2 promotes base excision repair by transcriptionally activating OGG1 in an ATM/ATR-dependent manner
24. Defective transfer of parental histone decreases frequency of homologous recombination by increasing free histone pools in budding yeast
25. S-phase checkpoint prevents leading strand degradation from strand-associated nicks at stalled replication forks
26. Defining the contribution of microRNA-specific Argonautes with slicer capability in animals
27. ATRX guards against aberrant differentiation in mesenchymal progenitor cells
28. Catalytic residues of microRNA Argonautes play a modest role in microRNA star strand destabilization in C. elegans
29. Viral reprogramming of host transcription initiation
30. WSB1/2 target chromatin-bound lysine-methylated RelA for proteasomal degradation and NF-κB termination
31. Correction of non-random mutational biases along a linear bacterial chromosome by the mismatch repair endonuclease NucS
32. HBO1 determines SMAD action in pluripotency and mesendoderm specification
33. CSB and SMARCAL1 compete for RPA32 at stalled forks and differentially control the fate of stalled forks in BRCA2-deficient cells
34. RNA–RNA interactions between respiratory syncytial virus and miR-26 and miR-27 are associated with regulation of cell cycle and antiviral immunity
35. DNA-PKcs suppresses illegitimate chromosome rearrangements
36. UPF1 ATPase autoinhibition and activation modulate RNA binding kinetics and NMD efficiency
37. Tracking pairwise genomic loci by the ParB–ParS and Noc-NBS systems in living cells
38. LC3B drives transcription-associated homologous recombination via direct interaction with R-loops
39. The jet-like chromatin structure defines active secondary metabolism in fungi
40. Processivity and specificity of histone acetylation by the male-specific lethal complex
41. RNA-binding properties orchestrate TDP-43 homeostasis through condensate formation in vivo
42. Dynamics of miRNA accumulation during C. elegans larval development
43. Nuclear RNA-related processes modulate the assembly of cytoplasmic RNA granules
44. Cryo-EM structure of SRP68/72 reveals an extended dimerization domain with RNA-binding activity
45. A Fur family protein BosR is a novel RNA-binding protein that controls rpoS RNA stability in the Lyme disease pathogen
46. A combinatorial approach for achieving CNS-selective RNAi
更新于 31 分钟前

近期历史最近 100 条记录

2024-05-22 High-density generation of spatial transcriptomics with STAGE
2024-05-22 Comprehensive genomic features indicative for Notch responsiveness
2024-05-22 SifiNet: a robust and accurate method to identify feature gene sets and annotate cells
2024-05-22 Genome-wide screening and functional validation of methylation barriers near promoters
2024-05-22 The discovery of novel noncoding RNAs in 50 bacterial genomes
2024-05-22 Comprehensive profiling of L1 retrotransposons in mouse
2024-05-22 Live-cell imaging reveals the trade-off between target search flexibility and efficiency for Cas9 and Cas12a
2024-05-22 Caspase-mediated processing of TRBP regulates apoptosis during viral infection
2024-05-22 SARS-CoV-2 nsp15 preferentially degrades AU-rich dsRNA via its dsRNA nickase activity
2024-05-22 m6ACali: machine learning-powered calibration for accurate m6A detection in MeRIP-Seq
2024-05-22 Biochemical and structural characterization of Fapy•dG replication by Human DNA polymerase β
2024-05-22 Examining chromatin heterogeneity through PacBio long-read sequencing of M.EcoGII methylated genomes: an m6A detection efficiency and calling bias correcting pipeline
2024-05-22 Correction to ‘STIM1 translocation to the nucleus protects cells from DNA damage’
2024-05-22 A novel transient receptor potential C3/C6 selective activator induces the cellular uptake of antisense oligonucleotides
2024-05-22 Fourteen years of cellular deconvolution: methodology, applications, technical evaluation and outstanding challenges
2024-05-22 Activity reconstitution of Kre33 and Tan1 reveals a molecular ruler mechanism in eukaryotic tRNA acetylation
2024-05-22 Quantifying the activity profile of ASO and siRNA conjugates in glioblastoma xenograft tumors in vivo
2024-05-22 CRISPR-Cas tools for simultaneous transcription & translation control in bacteria
2024-05-22 Retraction of ‘Dissecting the splicing mechanism of the Drosophila editing enzyme; dADAR’
2024-05-22 Definition of the binding specificity of the T7 bacteriophage primase by analysis of a protein binding microarray using a thermodynamic model
2024-05-22 NetActivity enhances transcriptional signals by combining gene expression into robust gene set activity scores through interpretable autoencoders
2024-05-22 RecA-dependent or independent recombination of plasmid DNA generates a conflict with the host EcoKI immunity by launching restriction alleviation
2024-05-22 SIRT2 promotes base excision repair by transcriptionally activating OGG1 in an ATM/ATR-dependent manner
2024-05-22 Defective transfer of parental histone decreases frequency of homologous recombination by increasing free histone pools in budding yeast
2024-05-22 S-phase checkpoint prevents leading strand degradation from strand-associated nicks at stalled replication forks
2024-05-22 Defining the contribution of microRNA-specific Argonautes with slicer capability in animals
2024-05-22 ATRX guards against aberrant differentiation in mesenchymal progenitor cells
2024-05-22 Catalytic residues of microRNA Argonautes play a modest role in microRNA star strand destabilization in C. elegans
2024-05-22 Viral reprogramming of host transcription initiation
2024-05-22 WSB1/2 target chromatin-bound lysine-methylated RelA for proteasomal degradation and NF-κB termination
2024-05-22 Correction of non-random mutational biases along a linear bacterial chromosome by the mismatch repair endonuclease NucS
2024-05-22 HBO1 determines SMAD action in pluripotency and mesendoderm specification
2024-05-22 CSB and SMARCAL1 compete for RPA32 at stalled forks and differentially control the fate of stalled forks in BRCA2-deficient cells
2024-05-22 RNA–RNA interactions between respiratory syncytial virus and miR-26 and miR-27 are associated with regulation of cell cycle and antiviral immunity
2024-05-22 DNA-PKcs suppresses illegitimate chromosome rearrangements
2024-05-22 UPF1 ATPase autoinhibition and activation modulate RNA binding kinetics and NMD efficiency
2024-05-22 Tracking pairwise genomic loci by the ParB–ParS and Noc-NBS systems in living cells
2024-05-22 LC3B drives transcription-associated homologous recombination via direct interaction with R-loops
2024-05-22 The jet-like chromatin structure defines active secondary metabolism in fungi
2024-05-22 Processivity and specificity of histone acetylation by the male-specific lethal complex
2024-05-22 RNA-binding properties orchestrate TDP-43 homeostasis through condensate formation in vivo
2024-05-22 Dynamics of miRNA accumulation during C. elegans larval development
2024-05-22 Nuclear RNA-related processes modulate the assembly of cytoplasmic RNA granules
2024-05-22 Cryo-EM structure of SRP68/72 reveals an extended dimerization domain with RNA-binding activity
2024-05-22 A Fur family protein BosR is a novel RNA-binding protein that controls rpoS RNA stability in the Lyme disease pathogen
2024-05-22 A combinatorial approach for achieving CNS-selective RNAi
2024-05-08 Structure-functional characterization of Lactococcus AbiA phage defense system
2024-05-08 Identifying human pre-mRNA cleavage and polyadenylation factors by genome-wide CRISPR screens using a dual fluorescence readthrough reporter
2024-05-08 Mutation rate heterogeneity at the sub-gene scale due to local DNA hypomethylation
2024-05-08 Correction to ‘Non-CpG methylation by DNMT3B facilitates REST binding and gene silencing in developing mouse hearts’
2024-05-08 Discovery of a polymorphic gene fusion via bottom-up chimeric RNA prediction
2024-05-08 ORBIT for E. coli: kilobase-scale oligonucleotide recombineering at high throughput and high efficiency
2024-05-08 Bridging DNA contacts allow Dps from E. coli to condense DNA
2024-05-08 Protein G-quadruplex interactions and their effects on phase transitions and protein aggregation
2024-05-08 Discovering DNA shape motifs with multiple DNA shape features: generalization, methods, and validation
2024-05-08 Correction to ‘POT-3 preferentially binds the terminal DNA-repeat on the telomeric G-overhang’
2024-05-08 Resolving the intricate binding of neomycin B to multiple binding motifs of a neomycin-sensing riboswitch aptamer by native top-down mass spectrometry and NMR spectroscopy
2024-05-08 BRD2 promotes antibody class switch recombination by facilitating DNA repair in collaboration with NIPBL
2024-05-08 Multiplexed in-situ mutagenesis driven by a dCas12a-based dual-function base editor
2024-05-08 The effect of pseudoknot base pairing on cotranscriptional structural switching of the fluoride riboswitch
2024-05-08 Correction to ‘SomaMutDB: a database of somatic mutations in normal human tissues’
2024-05-08 Unearthing a novel function of SRSF1 in binding and unfolding of RNA G-quadruplexes
2024-05-08 A phage nucleus-associated RNA-binding protein is required for jumbo phage infection
2024-05-08 Live-cell imaging of human apurinic/apyrimidinic endonuclease 1 in the nucleus and nucleolus using a chaperone@DNA probe
2024-05-08 The diversity of splicing modifiers acting on A-1 bulged 5′-splice sites reveals rules for rational drug design
2024-05-08 Critical steps in the assembly process of the bacterial 50S ribosomal subunit
2024-05-08 RNA polymerase SI3 domain modulates global transcriptional pausing and pause-site fluctuations
2024-05-08 The crystal structure of bacteriophage λ RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins
2024-05-08 txtools: an R package facilitating analysis of RNA modifications, structures, and interactions
2024-05-08 Biochemical characterization of the meiosis-essential yet evolutionarily divergent topoisomerase VIB-like protein MTOPVIB from Arabidopsis thaliana
2024-05-08 Determinants of CRISPR Cas12a nuclease activation by DNA and RNA targets
2024-05-08 Molecular basis of A. thaliana KEOPS complex in biosynthesizing tRNA t6A
2024-05-08 Set2 regulates Ccp1 and Swc2 to ensure centromeric stability by retargeting CENP-A
2024-05-08 Novel insights into the role of translesion synthesis polymerase in DNA incorporation and bypass of 5-fluorouracil in colorectal cancer
2024-05-08 COSA-1 mediated pro-crossover complex formation promotes meiotic crossing over in C. elegans
2024-05-08 Physical interaction with Spo11 mediates the localisation of Mre11 to chromatin in meiosis and promotes its nuclease activity
2024-05-08 DNA-PK controls Apollo’s access to leading-end telomeres
2024-05-08 The origin recognition complex requires chromatin tethering by a hypervariable intrinsically disordered region that is functionally conserved from sponge to man
2024-05-08 Pathogenic CANVAS (AAGGG)n repeats stall DNA replication due to the formation of alternative DNA structures
2024-05-08 Landscape of RNA pseudouridylation in archaeon Sulfolobus islandicus
2024-05-08 Phylogeny-linked occurrence of ribosome stalling on the mRNAs of Arabidopsis unfolded protein response factor bZIP60 orthologs in divergent plant species
2024-05-08 Ribosomal collision is not a prerequisite for ZNF598-mediated ribosome ubiquitination and disassembly of ribosomal complexes by ASCC
2024-05-08 Zebrafish Mbd5 binds to RNA m5C and regulates histone deubiquitylation and gene expression in development metabolism and behavior
2024-05-08 Leveraging chromatin state transitions for the identification of regulatory networks orchestrating heart regeneration
2024-05-08 Temperature-sensitive splicing defects in Arabidopsis mitochondria caused by mutations in the ROOT PRIMORDIUM DEFECTIVE 1 gene
2024-05-08 Lineage-determining transcription factor-driven promoters regulate cell type-specific macrophage gene expression
2024-05-08 Activation of zinc uptake regulator by zinc binding to three regulatory sites
2024-05-08 RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria
2024-05-08 Chromatin damage generated by DNA intercalators leads to degradation of RNA Polymerase II
2024-05-08 All exons are not created equal—exon vulnerability determines the effect of exonic mutations on splicing
2024-05-08 Differential expression of paralog RNA binding proteins establishes a dynamic splicing program required for normal cerebral cortex development
2024-04-24 CRISPR in Nucleic Acids Research: the sequel
2024-04-24 Correction to ‘Correcting 4sU induced quantification bias in nucleotide conversion RNA-seq data’
2024-04-24 Comprehensive analysis of intramolecular G-quadruplex structures: furthering the understanding of their formalism
2024-04-24 Correction to ‘High fidelity DNA strand-separation is the major specificity determinant in DNA methyltransferase CcrM’s catalytic mechanism’
2024-04-24 Correction to ‘Mechanistic insights into the alternative ribosome recycling by HflXr’
2024-04-24 Distinct functions for the paralogous RBM41 and U11/U12-65K proteins in the minor spliceosome
2024-04-24 Engineering an Escherichia coli strain for production of long single-stranded DNA
2024-04-24 Exhaustive identification of genome-wide binding events of transcriptional regulators
2024-04-24 Expanding the flexibility of base editing for high-throughput genetic screens in bacteria

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